Frequenty Asked Questions - Comparative Genomics

How do I get alignments of homologous proteins? Can I get the CDS (coding sequence) alignments as well?

Protein alignments of homologous are available using the orthologues link from the Gene tab in the browser. The link at the bottom of the page allows a customised view of the protein alignments. The alignments from protein and cds can also be obtained through the API.